Real Skill packageSource verifiedGitHub repository

locus-to-gene-mapper-skill

Map GWAS loci to ranked candidate genes using a deterministic multi-skill chain (EFO -> GWAS -> coordinates -> Open Targets L2G/coloc -> eQTL -> burden/coding context), with reproducible tables and optional figures. Use when a user provides a trait/EFO term and/or lead variants and needs locus-to-gene prioritization for downstream biology decisions.

Identity and source

Publisher attributionOpenAIrepository owner unverified by skillvetai
Functional categorySearch, Research & Knowledgeautomatically inferred · 64% rule confidence
Package forminstruction with code4 recorded files
Canonical sourceGitHub repositorygithub:openai/plugins:plugins/life-science-research/skills/locus-to-gene-mapper-skill
Open canonical source ↗

Platform declarations

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OpenAI Codexdeclared onlyProvenance: platform official

Independent structural checks

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Claude Codepasses structure
Checker 0.1.0 · agent-skills-2026-08-13+claude-code-docs-2026-08-13 · 8/13/2026.claude/skills/locus-to-gene-mapper-skill

Runtime, accounts, dependencies, permissions, network behavior and task quality remain untested.

OpenAI Codexpasses structure
Checker 0.1.0 · agent-skills-2026-08-13+codex-docs-2026-08-13 · 8/13/2026.agents/skills/locus-to-gene-mapper-skill

Runtime, accounts, dependencies, permissions, network behavior and task quality remain untested.

OpenClawpasses structure
Checker 0.1.0 · agent-skills-2026-08-13+openclaw-docs-2026-08-13 · 8/13/2026skills/locus-to-gene-mapper-skill

Runtime, accounts, dependencies, permissions, network behavior and task quality remain untested.

Installation and inspection

This adapter did not publish an authoritative install command. Use the canonical source instructions and do not infer an installation path from the repository layout.

Security evidence

SkillVetAI static result: no findings detected

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Status
completed
Coverage
full text content
Files
4 / 4 inspected as text
Checked
8/13/2026, 9:39:53 AM
Scanner
0.1.3
Policy
1.0.3
5 inferred permission indicators
  • shell execution — automatically inferred
  • network access — automatically inferred
  • filesystem read — automatically inferred
  • filesystem write — automatically inferred
  • external write action — automatically inferred
4 dependency and API indicators
  • api: api.ncbi.nlm.nih.gov
  • api: api.platform.opentargets.org
  • api: gnomad.broadinstitute.org
  • api: www.ebi.ac.uk

Recorded files

The catalog stores hashes and an inventory summary for change detection. It does not republish the package contents.

Package content hashsha256:0a7a18fef3c1f92625ecc47488e207d83370c919eecda5675c443769712e1d14
Show up to 4 recorded paths
  • SKILL.md
  • agents/openai.yaml
  • scripts/map_locus_to_gene.py
  • scripts/test_map_locus_to_gene.py